37 MCP servers and agent skills in the Biology, Medicine and Bioinformatics category, ranked by quality score.
Typed, validated FHIR tools for healthcare AI agents — build, read, validate, and code FHIR resources from a patient bundle, with terminology lookup and machine-readable validation reports built for fix-and-retry. `pip install healthchain[mcp]`
MCP server for spatial transcriptomics analysis with 60+ integrated methods covering cell annotation, deconvolution, spatial statistics, and visualization.
MCP server and Claude Plugin for a full ENCODE Project genomic data and analysis toolkit — search, download, track, and analyze functional genomics experiments.
The only MCP server bridging DICOM, HL7v2, and FHIR in one package. Cross-standard mapping, Mirth Connect channel generation, vendor private tag decoding (GE, Siemens, Philips), and integration pattern knowledge. Built by a 19-year healthcare IT veteran. `pip install dicom-hl7-mcp`
AlphaFold MCP server integrating AlphaFold DB with eight additional public biomedical data sources, backed by a local SQLite knowledge graph for structural-confidence, variant, disease/phenotype, drug-target, and orthology workflows. `uvx alphafold-sovereign-mcp`
32 tools for plant-genomics locus lookup across 11 public backends (Ensembl Plants, Phytozome, UniProtKB, KEGG, STRING-DB, Gramene, Europe PMC, QuickGO, NCBI BLAST, ATTED-II, BAR). Single-locus, parallel-batch, and cross-source synthesis variants; JSON output schemas and EDAM ontology tags on every tool. `pipx install plant-genomics-mcp`.
Auditable UniProt MCP server: 41 tools over the UniProt knowledgebase (entries, features, variants, PTMs, GO terms, cross-references) with per-query SHA-256 provenance and offline replay. `uvx uniprot-mcp-server`
MCP server for accessing personal health and biometric data including sleep stages, heart rate, HRV, glucose, workouts, calendar, and location via the Fulcra Life API with OAuth2 consent.
A stateless, deterministic Bio-Robotics Core Engine converting biological data (UniProt API) to Cartesian G-code coordinates using the Model Context Protocol. 🐍 🏠 🍎 🪟 🐧