genomoncology/biomcp B
genomoncology/biomcp
MCP Server
Active
Biomedical research MCP server providing access to PubMed, ClinicalTrials.gov, and MyVariant.info.
smaniches/alphafold-sovereign-mcp
smaniches/alphafold-sovereign-mcp
MCP Server
Active
Apache-2.0
cloudlocal
AlphaFold MCP server integrating AlphaFold DB with eight additional public biomedical data sources, backed by a local SQLite knowledge graph for structural-confidence, variant, disease/phenotype, drug-target, and orthology workflows. `uvx alphafold-sovereign-mcp`
C Quality 57/100
★ 4 stars
Updated 3d ago
Python
Installation
Example client config (verify package name in the repo README)
{
"mcpServers": {
"alphafold-sovereign-mcp": {
"command": "uvx",
"args": ["alphafold-sovereign-mcp"]
}
}
}Quality score breakdown
Transparent heuristic — same formula for every entry. Total 57/100.
GitHub stars (log scale)7/40
Maintenance activity25/25
License present10/10
Official project0/10
Not archived5/5
Meaningful description5/5
Repo topics set5/5
Related in Biology, Medicine and Bioinformatics
healthchainai/HealthChain B
healthchainai/HealthChain
MCP Server
Active
Typed, validated FHIR tools for healthcare AI agents — build, read, validate, and code FHIR resources from a patient bundle, with terminology lookup and machine-readable validation reports built for fix-and-retry. `pip install healthchain[mcp]`
the-momentum/apple-health-mcp-server B
the-momentum/apple-health-mcp-server
MCP Server
Maintained
An MCP server that provides access to exported data from Apple Health. Data analytics included.
cafferychen777/ChatSpatial B
cafferychen777/ChatSpatial
MCP Server
Active
MCP server for spatial transcriptomics analysis with 60+ integrated methods covering cell annotation, deconvolution, spatial statistics, and visualization.
wso2/fhir-mcp-server C
wso2/fhir-mcp-server
MCP Server
Maintained
Model Context Protocol server for Fast Healthcare Interoperability Resources (FHIR) APIs. Provides seamless integration with FHIR servers, enabling AI assistants to search, retrieve, create, update, and analyze clinical healthcare data with SMART-on-FHIR authentication support.
ammawla/encode-toolkit C
ammawla/encode-toolkit
MCP Server
Active
MCP server and Claude Plugin for a full ENCODE Project genomic data and analysis toolkit — search, download, track, and analyze functional genomics experiments.